sfftk-rw
stable
EMDB-SFF Read/Write Toolkit (
sfftk-rw
)
Understanding the EMDB-SFF Data Model
Interconverting EMDB-SFF Files
Miscellaneous Operations Using sfftk-rw
Developing with
sfftk-rw
sfftk-rw packages
sfftk-rw
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B
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C
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D
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E
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F
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G
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H
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I
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L
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M
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N
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O
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P
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R
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S
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T
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U
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V
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X
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Y
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Z
A
accession (sfftkrw.schema.adapter_v0_8_0_dev1.SFFExternalReference attribute)
add_args() (in module sfftkrw.core.parser)
alpha (sfftkrw.schema.adapter_v0_7_0_dev0.SFFRGBA attribute)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFRGBA attribute)
append() (sfftkrw.schema.base.SFFListType method)
as_hff() (sfftkrw.schema.adapter_v0_7_0_dev0.SFFBiologicalAnnotation method)
(sfftkrw.schema.adapter_v0_7_0_dev0.SFFBoundingBox method)
(sfftkrw.schema.adapter_v0_7_0_dev0.SFFComplexesAndMacromolecules method)
(sfftkrw.schema.adapter_v0_7_0_dev0.SFFLattice method)
(sfftkrw.schema.adapter_v0_7_0_dev0.SFFLatticeList method)
(sfftkrw.schema.adapter_v0_7_0_dev0.SFFMeshList method)
(sfftkrw.schema.adapter_v0_7_0_dev0.SFFRGBA method)
(sfftkrw.schema.adapter_v0_7_0_dev0.SFFSegment method)
(sfftkrw.schema.adapter_v0_7_0_dev0.SFFSegmentList method)
(sfftkrw.schema.adapter_v0_7_0_dev0.SFFSegmentation method)
(sfftkrw.schema.adapter_v0_7_0_dev0.SFFSoftware method)
(sfftkrw.schema.adapter_v0_7_0_dev0.SFFThreeDVolume method)
(sfftkrw.schema.adapter_v0_7_0_dev0.SFFTransformList method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFBiologicalAnnotation method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFBoundingBox method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFCone method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFCuboid method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFCylinder method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFEllipsoid method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFEncodedSequence method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFExternalReference method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFExternalReferenceList method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFGlobalExternalReferenceList method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFLattice method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFLatticeList method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFMesh method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFMeshList method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFNormals method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFRGBA method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFSegment method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFSegmentList method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFSegmentation method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFShapePrimitiveList method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFSoftware method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFSoftwareList method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFSubtomogramAverage method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFThreeDVolume method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFTransformList method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFTransformationMatrix method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFTriangles method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFVertices method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFVolume method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFVolumeIndex method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFVolumeStructure method)
(sfftkrw.schema.base.SFFType method)
as_json() (sfftkrw.schema.adapter_v0_7_0_dev0.SFFBiologicalAnnotation method)
(sfftkrw.schema.adapter_v0_7_0_dev0.SFFBoundingBox method)
(sfftkrw.schema.adapter_v0_7_0_dev0.SFFExternalReference method)
(sfftkrw.schema.adapter_v0_7_0_dev0.SFFExternalReferenceList method)
(sfftkrw.schema.adapter_v0_7_0_dev0.SFFRGBA method)
(sfftkrw.schema.adapter_v0_7_0_dev0.SFFSegment method)
(sfftkrw.schema.adapter_v0_7_0_dev0.SFFSegmentation method)
(sfftkrw.schema.adapter_v0_7_0_dev0.SFFSoftware method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFBiologicalAnnotation method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFBoundingBox method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFCone method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFCuboid method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFCylinder method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFEllipsoid method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFEncodedSequence method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFExternalReference method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFExternalReferenceList method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFGlobalExternalReferenceList method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFLattice method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFLatticeList method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFMesh method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFMeshList method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFRGBA method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFSegment method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFSegmentList method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFSegmentation method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFShapePrimitiveList method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFSoftware method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFSoftwareList method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFSubtomogramAverage method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFThreeDVolume method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFTransformList method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFTransformationMatrix method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFVolume method)
(sfftkrw.schema.base.SFFType method)
attribute (sfftkrw.schema.adapter_v0_7_0_dev0.SFFShape attribute)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFShape attribute)
B
biological_annotation (sfftkrw.schema.adapter_v0_7_0_dev0.SFFSegment attribute)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFSegment attribute)
blue (sfftkrw.schema.adapter_v0_7_0_dev0.SFFRGBA attribute)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFRGBA attribute)
bottom_radius (sfftkrw.schema.adapter_v0_7_0_dev0.SFFCone attribute)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFCone attribute)
bounding_box (sfftkrw.schema.adapter_v0_7_0_dev0.SFFSegmentation attribute)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFSegmentation attribute)
C
canonicalEulerAnglesType (class in sfftkrw.schema.v0_7_0_dev0)
(class in sfftkrw.schema.v0_8_0_dev1)
clear() (sfftkrw.schema.base.SFFListType method)
clear_annotation() (sfftkrw.schema.adapter_v0_7_0_dev0.SFFSegmentation method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFSegmentation method)
colour (sfftkrw.schema.adapter_v0_7_0_dev0.SFFSegment attribute)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFSegment attribute)
colourType (class in sfftkrw.schema.v0_7_0_dev0)
(class in sfftkrw.schema.v0_8_0_dev1)
cols (sfftkrw.schema.adapter_v0_7_0_dev0.SFFTransformationMatrix attribute)
(sfftkrw.schema.adapter_v0_7_0_dev0.SFFVolume attribute)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFTransformationMatrix attribute)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFVolume attribute)
complexes (sfftkrw.schema.adapter_v0_7_0_dev0.SFFComplexesAndMacromolecules attribute)
complexes_and_macromolecules (sfftkrw.schema.adapter_v0_7_0_dev0.SFFSegment attribute)
complexes_and_macromolecules_type (class in sfftkrw.schema.v0_8_0_dev1)
copy() (sfftkrw.schema.base.SFFListType method)
copy_annotation() (sfftkrw.schema.adapter_v0_7_0_dev0.SFFSegmentation method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFSegmentation method)
cuboid (class in sfftkrw.schema.v0_7_0_dev0)
(class in sfftkrw.schema.v0_8_0_dev1)
D
data (sfftkrw.schema.adapter_v0_7_0_dev0.SFFLattice attribute)
(sfftkrw.schema.adapter_v0_7_0_dev0.SFFTransformationMatrix attribute)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFLattice attribute)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFNormals attribute)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFTransformationMatrix attribute)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFTriangles attribute)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFVertices attribute)
data_array (sfftkrw.schema.adapter_v0_8_0_dev1.SFFEncodedSequence attribute)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFLattice attribute)
description (sfftkrw.schema.adapter_v0_7_0_dev0.SFFBiologicalAnnotation attribute)
(sfftkrw.schema.adapter_v0_7_0_dev0.SFFExternalReference attribute)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFBiologicalAnnotation attribute)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFExternalReference attribute)
designation (sfftkrw.schema.adapter_v0_7_0_dev0.SFFVertex attribute)
details (sfftkrw.schema.adapter_v0_7_0_dev0.SFFSegmentation attribute)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFSegmentation attribute)
diameter (sfftkrw.schema.adapter_v0_7_0_dev0.SFFCylinder attribute)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFCylinder attribute)
E
ellipsoid (class in sfftkrw.schema.v0_7_0_dev0)
(class in sfftkrw.schema.v0_8_0_dev1)
endianness (sfftkrw.schema.adapter_v0_7_0_dev0.SFFLattice attribute)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFLattice attribute)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFNormals attribute)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFTriangles attribute)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFVertices attribute)
eq_attrs (sfftkrw.schema.base.SFFType attribute)
export() (sfftkrw.schema.base.SFFType method)
extend() (sfftkrw.schema.base.SFFListType method)
external_references (sfftkrw.schema.adapter_v0_7_0_dev0.SFFBiologicalAnnotation attribute)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFBiologicalAnnotation attribute)
F
from_array() (sfftkrw.schema.adapter_v0_7_0_dev0.SFFLattice class method)
(sfftkrw.schema.adapter_v0_7_0_dev0.SFFTransformationMatrix class method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFEncodedSequence class method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFLattice class method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFTransformationMatrix class method)
from_bytes() (sfftkrw.schema.adapter_v0_7_0_dev0.SFFLattice class method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFEncodedSequence class method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFLattice class method)
from_file() (sfftkrw.schema.adapter_v0_7_0_dev0.SFFSegmentation class method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFSegmentation class method)
from_gds_type() (sfftkrw.schema.base.SFFIndexType class method)
(sfftkrw.schema.base.SFFListType class method)
(sfftkrw.schema.base.SFFType class method)
from_hff() (sfftkrw.schema.adapter_v0_7_0_dev0.SFFBiologicalAnnotation class method)
(sfftkrw.schema.adapter_v0_7_0_dev0.SFFBoundingBox class method)
(sfftkrw.schema.adapter_v0_7_0_dev0.SFFComplexList class method)
(sfftkrw.schema.adapter_v0_7_0_dev0.SFFComplexesAndMacromolecules class method)
(sfftkrw.schema.adapter_v0_7_0_dev0.SFFLattice class method)
(sfftkrw.schema.adapter_v0_7_0_dev0.SFFLatticeList class method)
(sfftkrw.schema.adapter_v0_7_0_dev0.SFFMacromoleculeList class method)
(sfftkrw.schema.adapter_v0_7_0_dev0.SFFMesh class method)
(sfftkrw.schema.adapter_v0_7_0_dev0.SFFMeshList class method)
(sfftkrw.schema.adapter_v0_7_0_dev0.SFFPolygonList class method)
(sfftkrw.schema.adapter_v0_7_0_dev0.SFFRGBA class method)
(sfftkrw.schema.adapter_v0_7_0_dev0.SFFSegment class method)
(sfftkrw.schema.adapter_v0_7_0_dev0.SFFSegmentList class method)
(sfftkrw.schema.adapter_v0_7_0_dev0.SFFSegmentation class method)
(sfftkrw.schema.adapter_v0_7_0_dev0.SFFShapePrimitiveList class method)
(sfftkrw.schema.adapter_v0_7_0_dev0.SFFSoftware class method)
(sfftkrw.schema.adapter_v0_7_0_dev0.SFFThreeDVolume class method)
(sfftkrw.schema.adapter_v0_7_0_dev0.SFFTransformList class method)
(sfftkrw.schema.adapter_v0_7_0_dev0.SFFVertexList class method)
(sfftkrw.schema.adapter_v0_7_0_dev0.SFFVolume class method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFBiologicalAnnotation class method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFBoundingBox class method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFCone class method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFCuboid class method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFCylinder class method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFEllipsoid class method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFEncodedSequence class method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFExternalReference class method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFExternalReferenceList class method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFGlobalExternalReferenceList class method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFLattice class method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFLatticeList class method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFMesh class method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFMeshList class method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFNormals class method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFRGBA class method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFSegment class method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFSegmentList class method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFSegmentation class method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFShapePrimitiveList class method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFSoftware class method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFSoftwareList class method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFSubtomogramAverage class method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFThreeDVolume class method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFTransformList class method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFTransformationMatrix class method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFTriangles class method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFVertices class method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFVolume class method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFVolumeIndex class method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFVolumeStructure class method)
(sfftkrw.schema.base.SFFType class method)
from_json() (sfftkrw.schema.adapter_v0_7_0_dev0.SFFBiologicalAnnotation class method)
(sfftkrw.schema.adapter_v0_7_0_dev0.SFFBoundingBox class method)
(sfftkrw.schema.adapter_v0_7_0_dev0.SFFExternalReference class method)
(sfftkrw.schema.adapter_v0_7_0_dev0.SFFExternalReferenceList class method)
(sfftkrw.schema.adapter_v0_7_0_dev0.SFFRGBA class method)
(sfftkrw.schema.adapter_v0_7_0_dev0.SFFSegment class method)
(sfftkrw.schema.adapter_v0_7_0_dev0.SFFSegmentation class method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFBiologicalAnnotation class method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFBoundingBox class method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFCone class method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFCuboid class method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFCylinder class method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFEllipsoid class method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFEncodedSequence class method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFExternalReference class method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFExternalReferenceList class method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFGlobalExternalReferenceList class method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFLattice class method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFLatticeList class method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFMesh class method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFMeshList class method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFRGBA class method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFSegment class method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFSegmentList class method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFSegmentation class method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFShapePrimitiveList class method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFSoftware class method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFSoftwareList class method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFSubtomogramAverage class method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFThreeDVolume class method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFTransformList class method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFTransformationMatrix class method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFVolume class method)
(sfftkrw.schema.base.SFFType class method)
G
gds_tag_name (sfftkrw.schema.base.SFFType attribute)
gds_type (sfftkrw.schema.adapter_v0_7_0_dev0.SFFComplexesAndMacromolecules attribute)
(sfftkrw.schema.adapter_v0_7_0_dev0.SFFCuboid attribute)
(sfftkrw.schema.adapter_v0_7_0_dev0.SFFEllipsoid attribute)
(sfftkrw.schema.adapter_v0_7_0_dev0.SFFSegment attribute)
(sfftkrw.schema.adapter_v0_7_0_dev0.SFFSegmentation attribute)
(sfftkrw.schema.adapter_v0_7_0_dev0.SFFTransformationMatrix attribute)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFCuboid attribute)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFEllipsoid attribute)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFNormals attribute)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFSegment attribute)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFSegmentation attribute)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFTransformList attribute)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFTransformationMatrix attribute)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFTriangles attribute)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFVertices attribute)
(sfftkrw.schema.base.SFFType attribute)
get_by_id() (sfftkrw.schema.base.SFFListType method)
get_ids() (sfftkrw.schema.base.SFFListType method)
get_path() (in module sfftkrw.core.utils)
get_printable_ascii_string() (in module sfftkrw.core.print_tools)
get_unique_id() (in module sfftkrw.core.utils)
get_version() (in module sfftkrw.core.utils)
global_external_references (sfftkrw.schema.adapter_v0_7_0_dev0.SFFSegmentation attribute)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFSegmentation attribute)
green (sfftkrw.schema.adapter_v0_7_0_dev0.SFFRGBA attribute)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFRGBA attribute)
H
height (sfftkrw.schema.adapter_v0_7_0_dev0.SFFCone attribute)
(sfftkrw.schema.adapter_v0_7_0_dev0.SFFCylinder attribute)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFCone attribute)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFCylinder attribute)
hsvType (class in sfftkrw.schema.v0_7_0_dev0)
(class in sfftkrw.schema.v0_8_0_dev1)
I
id (sfftkrw.schema.adapter_v0_7_0_dev0.SFFExternalReference attribute)
(sfftkrw.schema.adapter_v0_7_0_dev0.SFFLattice attribute)
(sfftkrw.schema.adapter_v0_7_0_dev0.SFFPolygon attribute)
(sfftkrw.schema.adapter_v0_7_0_dev0.SFFSegment attribute)
(sfftkrw.schema.adapter_v0_7_0_dev0.SFFShape attribute)
(sfftkrw.schema.adapter_v0_7_0_dev0.SFFTransformationMatrix attribute)
(sfftkrw.schema.adapter_v0_7_0_dev0.SFFVertex attribute)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFExternalReference attribute)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFLattice attribute)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFMesh attribute)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFSegment attribute)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFShape attribute)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFSoftware attribute)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFTransformationMatrix attribute)
ids (sfftkrw.schema.adapter_v0_7_0_dev0.SFFComplexList attribute)
(sfftkrw.schema.adapter_v0_7_0_dev0.SFFMacromoleculeList attribute)
increment_by (sfftkrw.schema.base.SFFIndexType attribute)
index_attr (sfftkrw.schema.base.SFFIndexType attribute)
index_in_super (sfftkrw.schema.base.SFFIndexType attribute)
insert() (sfftkrw.schema.base.SFFListType method)
integerVectorType (class in sfftkrw.schema.v0_7_0_dev0)
(class in sfftkrw.schema.v0_8_0_dev1)
iter_attr (sfftkrw.schema.base.SFFListType attribute)
L
label (sfftkrw.schema.adapter_v0_7_0_dev0.SFFExternalReference attribute)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFExternalReference attribute)
lattice_id (sfftkrw.schema.adapter_v0_7_0_dev0.SFFThreeDVolume attribute)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFSubtomogramAverage attribute)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFThreeDVolume attribute)
lattice_list (sfftkrw.schema.adapter_v0_8_0_dev1.SFFSegmentation attribute)
lattices (sfftkrw.schema.adapter_v0_7_0_dev0.SFFSegmentation attribute)
M
macromolecules (sfftkrw.schema.adapter_v0_7_0_dev0.SFFComplexesAndMacromolecules attribute)
macromoleculesAndComplexesType (class in sfftkrw.schema.v0_7_0_dev0)
merge_annotation() (sfftkrw.schema.adapter_v0_7_0_dev0.SFFSegmentation method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFSegmentation method)
mesh_list (sfftkrw.schema.adapter_v0_8_0_dev1.SFFSegment attribute)
meshes (sfftkrw.schema.adapter_v0_7_0_dev0.SFFSegment attribute)
meshPointType (class in sfftkrw.schema.v0_7_0_dev0)
(class in sfftkrw.schema.v0_8_0_dev1)
mode (sfftkrw.schema.adapter_v0_7_0_dev0.SFFLattice attribute)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFLattice attribute)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFNormals attribute)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFTriangles attribute)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFVertices attribute)
N
name (sfftkrw.schema.adapter_v0_7_0_dev0.SFFBiologicalAnnotation attribute)
(sfftkrw.schema.adapter_v0_7_0_dev0.SFFSegmentation attribute)
(sfftkrw.schema.adapter_v0_7_0_dev0.SFFSoftware attribute)
,
[1]
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFBiologicalAnnotation attribute)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFSegmentation attribute)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFSoftware attribute)
,
[1]
normals (sfftkrw.schema.adapter_v0_8_0_dev1.SFFMesh attribute)
normals_type (class in sfftkrw.schema.v0_8_0_dev1)
num_cones (sfftkrw.schema.adapter_v0_7_0_dev0.SFFShapePrimitiveList attribute)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFShapePrimitiveList attribute)
num_cuboids (sfftkrw.schema.adapter_v0_7_0_dev0.SFFShapePrimitiveList attribute)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFShapePrimitiveList attribute)
num_cylinders (sfftkrw.schema.adapter_v0_7_0_dev0.SFFShapePrimitiveList attribute)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFShapePrimitiveList attribute)
num_ellipsoids (sfftkrw.schema.adapter_v0_7_0_dev0.SFFShapePrimitiveList attribute)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFShapePrimitiveList attribute)
num_global_external_references (sfftkrw.schema.adapter_v0_7_0_dev0.SFFSegmentation attribute)
num_items_kwarg (sfftkrw.schema.adapter_v0_8_0_dev1.SFFEncodedSequence attribute)
num_normals (sfftkrw.schema.adapter_v0_8_0_dev1.SFFNormals attribute)
num_polygons (sfftkrw.schema.adapter_v0_7_0_dev0.SFFMesh attribute)
(sfftkrw.schema.adapter_v0_7_0_dev0.SFFPolygonList attribute)
num_tranformation_matrices (sfftkrw.schema.adapter_v0_7_0_dev0.SFFTransformList attribute)
num_triangles (sfftkrw.schema.adapter_v0_8_0_dev1.SFFTriangles attribute)
num_vertices (sfftkrw.schema.adapter_v0_7_0_dev0.SFFMesh attribute)
(sfftkrw.schema.adapter_v0_7_0_dev0.SFFVertexList attribute)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFVertices attribute)
number_of_instances (sfftkrw.schema.adapter_v0_7_0_dev0.SFFBiologicalAnnotation attribute)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFBiologicalAnnotation attribute)
O
other_type (sfftkrw.schema.adapter_v0_7_0_dev0.SFFExternalReference attribute)
P
parent_id (sfftkrw.schema.adapter_v0_7_0_dev0.SFFSegment attribute)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFSegment attribute)
parse_args() (in module sfftkrw.core.parser)
point (sfftkrw.schema.adapter_v0_7_0_dev0.SFFVertex attribute)
polygon_ids (sfftkrw.schema.adapter_v0_7_0_dev0.SFFPolygonList attribute)
polygons (sfftkrw.schema.adapter_v0_7_0_dev0.SFFMesh attribute)
pop() (sfftkrw.schema.base.SFFListType method)
primary_descriptor (sfftkrw.schema.adapter_v0_7_0_dev0.SFFSegmentation attribute)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFSegmentation attribute)
print_date() (in module sfftkrw.core.print_tools)
print_static() (in module sfftkrw.core.print_tools)
processing_details (sfftkrw.schema.adapter_v0_7_0_dev0.SFFSoftware attribute)
,
[1]
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFSoftware attribute)
,
[1]
R
red (sfftkrw.schema.adapter_v0_7_0_dev0.SFFRGBA attribute)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFRGBA attribute)
remove() (sfftkrw.schema.base.SFFListType method)
repr_args (sfftkrw.schema.base.SFFType attribute)
repr_string (sfftkrw.schema.base.SFFType attribute)
reset_id() (sfftkrw.schema.base.SFFIndexType class method)
resource (sfftkrw.schema.adapter_v0_8_0_dev1.SFFExternalReference attribute)
reverse() (sfftkrw.schema.base.SFFListType method)
rgba_to_hex() (in module sfftkrw.core.utils)
rows (sfftkrw.schema.adapter_v0_7_0_dev0.SFFTransformationMatrix attribute)
(sfftkrw.schema.adapter_v0_7_0_dev0.SFFVolume attribute)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFTransformationMatrix attribute)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFVolume attribute)
runLengthEncodingType (class in sfftkrw.schema.v0_7_0_dev0)
(class in sfftkrw.schema.v0_8_0_dev1)
S
sections (sfftkrw.schema.adapter_v0_7_0_dev0.SFFVolume attribute)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFVolume attribute)
segment_list (sfftkrw.schema.adapter_v0_8_0_dev1.SFFSegmentation attribute)
segment_type (class in sfftkrw.schema.v0_8_0_dev1)
segmentation (class in sfftkrw.schema.v0_7_0_dev0)
(class in sfftkrw.schema.v0_8_0_dev1)
segments (sfftkrw.schema.adapter_v0_7_0_dev0.SFFSegmentation attribute)
segmentType (class in sfftkrw.schema.v0_7_0_dev0)
SFFAttribute (class in sfftkrw.schema.base)
SFFBiologicalAnnotation (class in sfftkrw.schema.adapter_v0_7_0_dev0)
(class in sfftkrw.schema.adapter_v0_8_0_dev1)
SFFBoundingBox (class in sfftkrw.schema.adapter_v0_7_0_dev0)
(class in sfftkrw.schema.adapter_v0_8_0_dev1)
SFFComplexesAndMacromolecules (class in sfftkrw.schema.adapter_v0_7_0_dev0)
SFFComplexList (class in sfftkrw.schema.adapter_v0_7_0_dev0)
SFFCone (class in sfftkrw.schema.adapter_v0_7_0_dev0)
(class in sfftkrw.schema.adapter_v0_8_0_dev1)
SFFCuboid (class in sfftkrw.schema.adapter_v0_7_0_dev0)
(class in sfftkrw.schema.adapter_v0_8_0_dev1)
SFFCylinder (class in sfftkrw.schema.adapter_v0_7_0_dev0)
(class in sfftkrw.schema.adapter_v0_8_0_dev1)
SFFEllipsoid (class in sfftkrw.schema.adapter_v0_7_0_dev0)
(class in sfftkrw.schema.adapter_v0_8_0_dev1)
SFFEncodedSequence (class in sfftkrw.schema.adapter_v0_8_0_dev1)
SFFExternalReference (class in sfftkrw.schema.adapter_v0_7_0_dev0)
(class in sfftkrw.schema.adapter_v0_8_0_dev1)
SFFExternalReferenceList (class in sfftkrw.schema.adapter_v0_7_0_dev0)
(class in sfftkrw.schema.adapter_v0_8_0_dev1)
SFFGlobalExternalReferenceList (class in sfftkrw.schema.adapter_v0_7_0_dev0)
(class in sfftkrw.schema.adapter_v0_8_0_dev1)
SFFIndexType (class in sfftkrw.schema.base)
SFFLattice (class in sfftkrw.schema.adapter_v0_7_0_dev0)
(class in sfftkrw.schema.adapter_v0_8_0_dev1)
SFFLatticeList (class in sfftkrw.schema.adapter_v0_7_0_dev0)
(class in sfftkrw.schema.adapter_v0_8_0_dev1)
SFFListType (class in sfftkrw.schema.base)
SFFMacromoleculeList (class in sfftkrw.schema.adapter_v0_7_0_dev0)
SFFMesh (class in sfftkrw.schema.adapter_v0_7_0_dev0)
(class in sfftkrw.schema.adapter_v0_8_0_dev1)
SFFMeshList (class in sfftkrw.schema.adapter_v0_7_0_dev0)
(class in sfftkrw.schema.adapter_v0_8_0_dev1)
SFFNormals (class in sfftkrw.schema.adapter_v0_8_0_dev1)
SFFPolygon (class in sfftkrw.schema.adapter_v0_7_0_dev0)
SFFPolygonList (class in sfftkrw.schema.adapter_v0_7_0_dev0)
SFFRGBA (class in sfftkrw.schema.adapter_v0_7_0_dev0)
(class in sfftkrw.schema.adapter_v0_8_0_dev1)
SFFSegment (class in sfftkrw.schema.adapter_v0_7_0_dev0)
(class in sfftkrw.schema.adapter_v0_8_0_dev1)
SFFSegmentation (class in sfftkrw.schema.adapter_v0_7_0_dev0)
(class in sfftkrw.schema.adapter_v0_8_0_dev1)
SFFSegmentList (class in sfftkrw.schema.adapter_v0_7_0_dev0)
(class in sfftkrw.schema.adapter_v0_8_0_dev1)
SFFShape (class in sfftkrw.schema.adapter_v0_7_0_dev0)
(class in sfftkrw.schema.adapter_v0_8_0_dev1)
SFFShapePrimitiveList (class in sfftkrw.schema.adapter_v0_7_0_dev0)
(class in sfftkrw.schema.adapter_v0_8_0_dev1)
SFFSoftware (class in sfftkrw.schema.adapter_v0_7_0_dev0)
(class in sfftkrw.schema.adapter_v0_8_0_dev1)
SFFSoftwareList (class in sfftkrw.schema.adapter_v0_8_0_dev1)
SFFSubtomogramAverage (class in sfftkrw.schema.adapter_v0_8_0_dev1)
SFFThreeDVolume (class in sfftkrw.schema.adapter_v0_7_0_dev0)
(class in sfftkrw.schema.adapter_v0_8_0_dev1)
sfftkrw (module)
sfftkrw.__init__ (module)
sfftkrw.core.parser (module)
sfftkrw.core.print_tools (module)
sfftkrw.core.utils (module)
sfftkrw.schema.__init__ (module)
sfftkrw.schema.adapter_v0_7_0_dev0 (module)
sfftkrw.schema.adapter_v0_8_0_dev1 (module)
sfftkrw.schema.base (module)
sfftkrw.schema.v0_7_0_dev0 (module)
sfftkrw.schema.v0_8_0_dev1 (module)
SFFTransformationMatrix (class in sfftkrw.schema.adapter_v0_7_0_dev0)
(class in sfftkrw.schema.adapter_v0_8_0_dev1)
SFFTransformList (class in sfftkrw.schema.adapter_v0_7_0_dev0)
(class in sfftkrw.schema.adapter_v0_8_0_dev1)
SFFTriangles (class in sfftkrw.schema.adapter_v0_8_0_dev1)
SFFType (class in sfftkrw.schema.base)
SFFTypeError (class in sfftkrw.schema.base)
SFFValueError (class in sfftkrw.schema.base)
SFFVertex (class in sfftkrw.schema.adapter_v0_7_0_dev0)
SFFVertexList (class in sfftkrw.schema.adapter_v0_7_0_dev0)
SFFVertices (class in sfftkrw.schema.adapter_v0_8_0_dev1)
SFFVolume (class in sfftkrw.schema.adapter_v0_7_0_dev0)
(class in sfftkrw.schema.adapter_v0_8_0_dev1)
SFFVolumeIndex (class in sfftkrw.schema.adapter_v0_7_0_dev0)
(class in sfftkrw.schema.adapter_v0_8_0_dev1)
SFFVolumeStructure (class in sfftkrw.schema.adapter_v0_7_0_dev0)
(class in sfftkrw.schema.adapter_v0_8_0_dev1)
shape_primitive_list (sfftkrw.schema.adapter_v0_8_0_dev1.SFFSegment attribute)
shapes (sfftkrw.schema.adapter_v0_7_0_dev0.SFFSegment attribute)
sibling_classes (sfftkrw.schema.base.SFFListType attribute)
size (sfftkrw.schema.adapter_v0_7_0_dev0.SFFLattice attribute)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFLattice attribute)
software (sfftkrw.schema.adapter_v0_7_0_dev0.SFFSegmentation attribute)
software_list (sfftkrw.schema.adapter_v0_8_0_dev1.SFFSegmentation attribute)
start (sfftkrw.schema.adapter_v0_7_0_dev0.SFFLattice attribute)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFLattice attribute)
start_at (sfftkrw.schema.base.SFFIndexType attribute)
stringify() (sfftkrw.schema.adapter_v0_7_0_dev0.SFFTransformationMatrix static method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFTransformationMatrix static method)
T
three_d_volume (sfftkrw.schema.adapter_v0_8_0_dev1.SFFSegment attribute)
to_file() (sfftkrw.schema.adapter_v0_8_0_dev1.SFFSegmentation method)
transform_id (sfftkrw.schema.adapter_v0_7_0_dev0.SFFMesh attribute)
(sfftkrw.schema.adapter_v0_7_0_dev0.SFFShape attribute)
(sfftkrw.schema.adapter_v0_7_0_dev0.SFFThreeDVolume attribute)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFMesh attribute)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFShape attribute)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFSubtomogramAverage attribute)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFThreeDVolume attribute)
transform_list (sfftkrw.schema.adapter_v0_8_0_dev1.SFFSegmentation attribute)
transform_listType (class in sfftkrw.schema.v0_8_0_dev1)
transformation_matrix_type (class in sfftkrw.schema.v0_8_0_dev1)
transformationMatrixType (class in sfftkrw.schema.v0_7_0_dev0)
transforms (sfftkrw.schema.adapter_v0_7_0_dev0.SFFSegmentation attribute)
triangles (sfftkrw.schema.adapter_v0_8_0_dev1.SFFMesh attribute)
triangles_type (class in sfftkrw.schema.v0_8_0_dev1)
type (sfftkrw.schema.adapter_v0_7_0_dev0.SFFExternalReference attribute)
U
update_counter() (sfftkrw.schema.adapter_v0_7_0_dev0.SFFShape class method)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFShape class method)
update_index() (sfftkrw.schema.base.SFFIndexType static method)
url (sfftkrw.schema.adapter_v0_8_0_dev1.SFFExternalReference attribute)
V
value (sfftkrw.schema.adapter_v0_7_0_dev0.SFFExternalReference attribute)
(sfftkrw.schema.adapter_v0_7_0_dev0.SFFThreeDVolume attribute)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFSubtomogramAverage attribute)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFThreeDVolume attribute)
version (sfftkrw.schema.adapter_v0_7_0_dev0.SFFSegmentation attribute)
(sfftkrw.schema.adapter_v0_7_0_dev0.SFFSoftware attribute)
,
[1]
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFSegmentation attribute)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFSoftware attribute)
,
[1]
vertex_ids (sfftkrw.schema.adapter_v0_7_0_dev0.SFFVertexList attribute)
vertices (sfftkrw.schema.adapter_v0_7_0_dev0.SFFMesh attribute)
(sfftkrw.schema.adapter_v0_7_0_dev0.SFFPolygon attribute)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFMesh attribute)
vertices_type (class in sfftkrw.schema.v0_8_0_dev1)
volume (sfftkrw.schema.adapter_v0_7_0_dev0.SFFSegment attribute)
voxel_count (sfftkrw.schema.adapter_v0_7_0_dev0.SFFVolumeStructure attribute)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFVolumeStructure attribute)
X
x (sfftkrw.schema.adapter_v0_7_0_dev0.SFFCuboid attribute)
(sfftkrw.schema.adapter_v0_7_0_dev0.SFFEllipsoid attribute)
(sfftkrw.schema.adapter_v0_7_0_dev0.SFFVertex attribute)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFCuboid attribute)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFEllipsoid attribute)
xmax (sfftkrw.schema.adapter_v0_7_0_dev0.SFFBoundingBox attribute)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFBoundingBox attribute)
xmin (sfftkrw.schema.adapter_v0_7_0_dev0.SFFBoundingBox attribute)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFBoundingBox attribute)
Y
y (sfftkrw.schema.adapter_v0_7_0_dev0.SFFCuboid attribute)
(sfftkrw.schema.adapter_v0_7_0_dev0.SFFEllipsoid attribute)
(sfftkrw.schema.adapter_v0_7_0_dev0.SFFVertex attribute)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFCuboid attribute)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFEllipsoid attribute)
ymax (sfftkrw.schema.adapter_v0_7_0_dev0.SFFBoundingBox attribute)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFBoundingBox attribute)
ymin (sfftkrw.schema.adapter_v0_7_0_dev0.SFFBoundingBox attribute)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFBoundingBox attribute)
Z
z (sfftkrw.schema.adapter_v0_7_0_dev0.SFFCuboid attribute)
(sfftkrw.schema.adapter_v0_7_0_dev0.SFFEllipsoid attribute)
(sfftkrw.schema.adapter_v0_7_0_dev0.SFFVertex attribute)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFCuboid attribute)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFEllipsoid attribute)
zmax (sfftkrw.schema.adapter_v0_7_0_dev0.SFFBoundingBox attribute)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFBoundingBox attribute)
zmin (sfftkrw.schema.adapter_v0_7_0_dev0.SFFBoundingBox attribute)
(sfftkrw.schema.adapter_v0_8_0_dev1.SFFBoundingBox attribute)
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